Program & Agenda

Session Schedule


03 The use of genomics, proteomics and transcriptomics in coral reef studies

Session organizer(s)

Christian Voolstra, Red Sea Research Center, KAUST University
Christian.voolstra@kaust.edu.sa

David J. Miller, ARC Centre of Excellence for Coral Reef Studies, James Cook University
David.miller@jcu.edu.au

Paul F. Long, King's College London
Paul.long@kcl.ac.uk

David Bourne, Centre for Marine Microbiology and Genetics, Australian Institute of Marine Science (AIMS)
d.bourne@aims.gov.au

Timothy Ravasi, Division of Biological and Environmental Sciences & Engineering, KAUST University
timothy.ravasi@kaust.edu.sa



Date: 06/20/2016

Please click on the title of an abstract to view the complete abstract.


Oral Presentations


Location: 313 B

10:00
Aguilar, C.; Fôret, S.; Moya, A.; Bourne, D. G.; Miller, D. J.; ELEVATED PCO2 SUPPRESSES THE INNATE IMMUNE RESPONSE OF THE CORAL ACROPORA MILLEPORA TO LPS CHALLENGE (Abstract ID:28103) O

10:15
Moya, A.; Sakamaki, K.; Mason, B. M.; Huisman, L.; Foret, S.; Weiss, Y.; Bull, T. E.; Tomii, K.; Imai, K.; Hayward, D. C.; Ball, E. E.; Miller, D. J.; RAPID ACCLIMATION OF JUVENILE CORALS TO CO2-MEDIATED ACIDIFICATION BY UP-REGULATION OF HEAT SHOCK PROTEIN AND ANTI-APOPTOTIC BCL-2 GENES (Abstract ID:28197) O

10:30
Thomas, L.; Rose, N. H.; Morikawa, M. H.; Bay, R. A.; Ruiz-Jones, L.; Palumbi, S. R.; A LONG ROAD TO RECOVERY: USING RNA-SEQ TO UNDERSTAND THE CORAL STRESS RESPONSE TO NATURAL BLEACHING EVENTS (Abstract ID:28792) O

10:45
Levin, R. A.; Beltran, V. H.; Hill, R.; Kjelleberg, S.; McDougald, D.; Steinberg, P. D.; van Oppen, M. J.; SYMBIODINIUM EXPOSED: COMPARATIVE TRANSCRIPTOMICS REVEALS GENETIC BASIS OF THERMAL TOLERANCE (Abstract ID:30064) O

11:00
Krediet, C. J.; Lehnert, E. M.; Cleves, P. A.; Tran, C.; Pringle, J. R.; GENE EXPRESSION UNDER THERMAL STRESS AND THE POTENTIAL FOR THERMAL ACCLIMATION IN A SYMBIOTIC CNIDARIAN (Abstract ID:28069) O

11:15
Kirk, N. L.; Howells, E. J.; Abrego, D.; Dziedzic, K. E.; Burt, J.; Meyer, E.; TEMPORAL PATTERNS OF GENE EXPRESSION IN RESPONSE TO HEAT AND SALINITY STRESS IN PLATYGYRA DAEDALEA FROM THE PERSIAN GULF (Abstract ID:29774) O

11:30
Cziesielski, M. J.; Liew, Y.; Marondedze, C.; Aranda, M.; LAYER BY LAYER – TRANSCRIPTOMIC AND PROTEOMIC ANALYSIS OF HEAT-STRESSED STRAINS OF AIPTASIA PALLIDA (Abstract ID:29364) O

11:45
Kitchen, S. A.; Jiang, D.; Harii, S.; Satoh, N.; Weis, V. M.; Shinzato, C.; HYPERTHERMAL STRESS ALTERS TRANSCRIPTOMIC RESPONSE OF CORAL LARVAE AT THE ONSET OF SYMBIOSIS (Abstract ID:29494) O

14:00
Ling, L.; Krediet, C. J.; Pringle, J. R.; FOLLOWING PROTEOMIC CHANGES IN SYMBIOTIC AIPTASIA CYTOSOL AND SYMBIOSOME MEMBRANES DURING THERMAL STRESS (Abstract ID:29550) O

14:15
Matz, M. V.; Groves, D. B.; USING GENOMICS TO RECONSTRUCT CORAL POPULATION SIZES OVER THE PAST 100,000 YEARS (Abstract ID:29553) O

14:30
Aranda Lastra, M. I.; Li, Y.; Liew, Y. J.; Baumgarten, S.; Simakov, O.; Wilson, M.; Piel, J.; Ashoor, H.; Bougouffa, S.; Bajic, V.; Ryu, T.; Ravasi, T.; Bayer, T.; Micklem, G.; Kim, H.; Bhak, J.; LaJeunesse, T. C.; Voolstra, C. R.; GENOME ANALYSIS OF CORAL DINOFLAGELLATE SYMBIONTS HIGHLIGHTS EVOLUTIONARY ADAPTATIONS TO A SYMBIOTIC LIFESTYLE (Abstract ID:28676) O

14:45
López, E. H.; Palumbi, S. R.; UNCOVERING WITHIN-COLONY GENETIC DIVERSITY USING HIGH-THROUGHPUT SEQUENCING DATA OF CORALS (Abstract ID:28276) O

15:00
Cortesi, F.; Musilová, Z.; Matschiner, M.; Malmstrøm, M.; Tørresen, O. K.; Jentoft, S.; Carleton, K. L.; Marshall, N. J.; Salzburger, W.; VISUAL EVOLUTION: LESSONS LEARNED FROM 100 FISH GENOMES (Abstract ID:29528) O

15:15
Meyer, E.; Kirk, N. L.; Snelling, J.; Howells, E. J.; Abrego, D.; Burt, J. A.; GENETIC LINKAGE MAPS ENABLE FUNCTIONAL GENOMICS STUDIES OF CORAL THERMAL TOLERANCE (Abstract ID:29731) O

15:30
Vohsen, S. A.; Baums, I. B.; Fisher, C. R.; HIGH-THROUGHPUT METABOLOMICS IDENTIFIES SPECIES- AND HABITAT-SPECIFIC METABOLITES IN CORALS (Abstract ID:28925) O

15:45
Cockett, P. M.; Bird, C. E.; EVERY POPULATION MATTERS: HOTSPOTS OF GENOME-WIDE GENETIC DIVERSITY IN HAWAIIAN 'OPIHI (CELLANA EXARATA) (Abstract ID:29760) O

16:30
YING, H.; Miller, D.; Hayward, D.; Ball, E.; Foret, S.; GENOME-WIDE DNA METHYLATION PROFILING REVEALED COMPLEX ROLES IN ACROPORA MILLEPORA (Abstract ID:28995) O

16:45
Smith, E. G.; Hazzouri, K. M.; Dupont, J. M.; Warren, C. S.; Aranda, M.; Burt, J. A.; THE GENOMIC BASIS FOR ADAPTATION TO THERMALLY EXTREME REEFS (Abstract ID:28794) O

17:00
Sawall, Y.; Al-Sofyani, A.; Barshis, D. J.; SPATIO-TEMPORAL VARIATION OF CORAL GENE EXPRESSION ACROSS 12 LATITUDES AND 2 SEASONS IN THE RED SEA (TEMPERATURE: 21� - 33�C) (Abstract ID:29327) O

17:15
Wegley Kelly, L.; Haas, A. F.; Nelson, C. E.; Reyes, B. T.; Rohwer, F.; BIOGEOGRAPHY AND FUNCTIONAL ADAPTATION OF CORAL REEF MICROBES (Abstract ID:29013) O

17:30
Lin, M.; Forêt, S.; Miller, D. J.; ANALYSES OF CORALLIMORPHARIAN TRANSCRIPTOMES PROVIDES NEW PERSPECTIVES ON THE EVOLUTION OF CALCIFICATION IN THE SCLERACTINIA (CORALS) (Abstract ID:28129) O

17:45
Mass, T.; Drake, J. L.; Putnam, H. M.; Zelzion, U.; Gates, R. D.; Bhattacharya, D.; Falkowski, P. G.; TEMPORAL EXPRESSION PATTERN OF BIOMINERALIZATION PROTEINS DURING EARLY DEVELOPMENT IN THE STONY CORAL POCILLOPORA DAMICORNIS (Abstract ID:27829) O

18:15
Ganot, P.; Fritz, M.; Rausch, T.; Aurelle, D.; Haguenauer, A.; Romans, P.; Zoccola, D.; Tambutté, E.; Aranda, M.; Benes, V.; Allemand, D.; Tambutté, S.; CALCIFICATION IN CORALLIUM RUBRUM: DISSECTING THE PROCESS USING GENOMICS AND TRANSCRIPTOMICS TOGETHER WITH SCALPELS AND SCISSORS (Abstract ID:29459) O

Poster Presentations


Location: Poster/Exhibit Hall

15
Cui, G.; Liew, Y. J.; Li, Y.; Aranda, M.; CELL TYPE-SPECIFIC TRANSCRIPTOMIC ANALYSIS ON AIPTASIA SP. (Abstract ID:28662) P

16
Chung, R.; Gacesa, R.; Ward, M.; Long, P. F.; PROTEOMICS OF SYMBIOTIC FUNCTION, DYSFUNCTION AND RECOVERY IN REEF-BUILDING CORALS (Abstract ID:28065) P

17
Pratlong, M.; Brener, K.; Haguenauer, A.; Chabrol, O.; Mitta, G.; Toulza, E.; Pontarotti, P.; Aurelle, D.; THE EVOLUTIONARY CHALLENGE OF CLIMATE CHANGE: ADAPTIVE PROCESSES IN THE MEDITERRANEAN RED CORAL (Abstract ID:27813) P

19
Gierz, S. L.; Leggat, W.; TRANSCRIPTOME RESPONSE OF SYMBIODINIUM TO PROLONGED THERMAL STRESS (Abstract ID:27941) P

20
Oakley, C. A.; Durand, E.; Wilkinson, S. P.; Peng, L.; Weis, V. M.; Grossman, A. R.; Davy, S. K.; THERMAL SHOCK INDUCES HOST PROTEOSTASIS DISRUPTION AND ENDOPLASMIC RETICULUM STRESS IN THE MODEL CNIDARIAN AIPTASIA (Abstract ID:29323) P

21
Linsmayer, L. B.; Tomanek, L.; Tresguerres, M. T.; DIEL PATTERNS OF CELLULAR OXYGEN CONCENTRATIONS AND AEROBIC AND ANAEROBIC ENERGY PRODUCTION IN CORALS (Abstract ID:28899) P

22
Martinez Fernandez, A.; Barshis, D.; Potts, D. C.; Hernandez Terrones, L.; Rebolledo Vieyra, M.; Crook, E. D.; Paytan, A.; GENE EXPRESSION DIFFERENCES IN CARIBBEAN CORALS IN RESPONSE TO NATURALLY ACIDIFIED SUBMARINE SPRINGS: RESULTS FROM A RECIPROCAL TRANSPLANT EXPERIMENT (Abstract ID:30089) P

23
Wang, X.; Zoccola, D.; Voolstra, C. R.; Tambutte, S.; Aranda, M.; HOW CORALS GOT BONES -- COMPARATIVE GENOMICS HIGHLIGHTS THE EVOLUTION OF CORAL CALCIFICATON (Abstract ID:28763) P

24
Cleves, P. A.; Liddell, L. L.; Mason, B. M.; Pringle, J. R.; DEVELOPING TRANSGENIC TOOLS TO STUDY CNIDARIAN-SYMBIODINIUM SYMBIOSIS IN A SEA-ANEMONE MODEL SYSTEM (Abstract ID:29156) P

25
Yuan, T.; Huang, H.; A SEMI-IN SITU EXPERIMENT OF LARVAL DEVELOPMENT OF SCLERACTINIAN CORAL ACROPORA GEMMIFERA IN RESPONSE TO ELEVATED PCO2 (Abstract ID:29232) P

26
Vazquez-Villoldo, N.; Roberson, L.; Rosenthal, J.; A POSSIBLE ROLE FOR VITAMIN C IN CORAL CALCIFICATION (Abstract ID:29670) P

27
Frazier, M. M.; Helmkampf, M.; Geib, S.; Bellinger, R.; Takabayashi, M.; IMPACT OF GROWTH ANOMALY ON GENE EXPRESSION IN THE CORAL MONTIPORA CAPITATA (Abstract ID:30008) P

29
Dziedzic, K. E.; Meyer, E.; HERITABILITY AND GENOMIC BASIS FOR VARIATION IN THERMAL TOLERANCE OF THE CORAL HOLOBIONT IN ORBICELLA FAVEOLATA (Abstract ID:29877) P

30
Elder, H.; Dziedzic, K.; Meyer, E.; INTEGRATED GENOMIC RESOURCES FOR A TEMPERATE MODEL OF CNIDARIAN-ALGAL SYMBIOSIS (Abstract ID:29879) P


Date: 06/21/2016

Please click on the title of an abstract to view the complete abstract.


Oral Presentations


Location: 313 B

09:30
Mohamed, A. R.; Cumbo, V. R.; Harii, S.; Shinzato, C.; Xin, C.; Ragan, M. A.; Bourne, D. G.; Willis, B.; Ball, E. E.; Satoh, N.; Miller, D. J.; MOLECULAR MECHANISMS UNDERLYING ESTABLISHMENT OF CORAL-SYMBIODINIUM SYMBIOSIS: A TRANSCRIPTOMIC APPROACH (Abstract ID:27923) O

09:45
Helmkampf, M.; Frazier, M.; Bellinger, R.; Takabayashi, M.; HOLOTRANSCRIPTOME ANALYSIS REVEALS SYMBIODINIUM CLADE IDENTITY INFLUENCES CORAL HOST GENE EXPRESSION (Abstract ID:30010) O

10:00
Wessels, W.; Ball, E. E.; Cooke, I.; Shinzato, C.; Hayward, D. C.; Miller, D. J.; UNRAVELING SOFT CORAL EARLY DEVELOPMENT AND ITS MOLECULAR BASES (Abstract ID:28789) O

10:15
Tresguerres, M.; Pérez, S. O.; Barott, K. L.; CELLULAR LOCALIZATION AND POTENTIAL PHYSIOLOGICAL ROLES OF VACUOLAR PROTON ATPASE, SODIUM POTASSIUM ATPASE, SLC4S, AND PLASMA MEMBRANE CALCIUM ATPASE IN CORALS (Abstract ID:29734) O

10:30
Stuhr, M.; Reymond, C.; Kucera, M.; Blank-Landeshammer, B.; Kollipara, L.; Rieder, V.; Rahnenführer, J.; Sickmann, A.; Westphal, H.; APPLICATION OF MASS SPECTROMETRY-BASED PROTEOMICS TO STUDY LARGER BENTHIC FORAMINIFERA AND THEIR RESPONSES TO ENVIRONMENTAL CHANGES (Abstract ID:28735) O

11:00
Vollmer, S. V.; Libro, S.; THE GENETIC BASIS OF CORAL IMMUNITY AND DISEASE RESISTANCE (Abstract ID:28089) O

11:15
Andrade R., N. A.; Moya, A.; Miller, D. J.; ANALYSIS OF THE COMPETITION BETWEEN LOBOPHYTUM PAUCIFLORUM WITH TWO HARD CORALS (Abstract ID:29069) O