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019 Use of molecular tools and metagenomics to assess biogeochemical processes


Session organizer(s)

Thomas Mock
School of Environmental Sciences, University of East Anglia, UK
t.mock@uea.ac.uk

Frank Oliver Gloeckner
MPI for Marine Microbiology, Germany
fog@mpi-bremen.de

Julie LaRoche
Leibniz Institute of Marine Sciences (IFM-GEOMAR), Germany
jlaroche@ifm-geomar.de


Date: 01-27-09

Location: Les Muses

Please click on the title of an abstract to view the complete abstract.


Poster Presentations

Biegala Isabelle, I C; Bonnet Sophie,; Raimbault Patrick,; HIGH ABUNDANCE OF DIAZOTROPHIC PICO-CYANOBACTERIA ALONG NUTRIENT GRADIENTS IN PACIFIC WATERS (COASTAL AND OCEANIC) (Abstract ID:4281) P

Ozturk, B; Klockow, C; Glöckner, F O; METATRANSCRITOMIC SURVEY OF THE BACTERIAL COMMUNITIES IN THE NORTH SEA (Abstract ID:4797) P

RICHIER, S; FIORINI, S; KERROS, M E; GAZEAU, F; MIDDELBURG, J J; GATTUSO, J P; EFFECT OF OCEAN ACIDIFICATION ON EMILIANIA HUXLEYI CALCIFICATION: A MOLECULAR APPROACH (Abstract ID:5258) P

Tucker, S; Trudel, M; Welch, D W; Candy, J R; Morris, J F; Thiess, M; Wallace, C; Teel, D J; Crawford, W; Farley, E V;USING DNA-BASED STOCK IDENTIFICATION TO ELUCIDATE COASTAL MIGRATION OF JUVENILE SOCKEYE SALMON (ONCORHYNCHUS NERKA) (Abstract ID:5726) P

Orellana, M V; Ramos, H F; Eastham, A Q; Shannon, P; Bare, C; Armbrust,, E V; Baliga, N; THALASSIOSIRA PSEUDONANA PROTEOME, RESPONSE TO DIFFERENT NITROGEN SOURCES (Abstract ID:5993) P


Date: 01-28-09

Location: Erato

Please click on the title of an abstract to view the complete abstract.


Oral Presentations

10:30
Kemp, P F; THE CENTER FOR MICROBIAL OCEANOGRAPHY RESEARCH AND EDUCATION: RESEARCH FROM GENOMES TO BIOMES (OR: WHAT WOULD YOU DO WITH $52,000,000?) (Abstract ID:6018) o

11:00
Hewson, I; Paerl, R W; Karl, D M; Zehr, J P; BIOGEOCHEMICAL INSIGHTS FROM METAGENOMIC ANALYSES OF SURFACE WATER MICROBIAL ASSEMBLAGES ACROSS THE CENTRAL PACIFIC EQUATORIAL UPWELLING REGIME (Abstract ID:4629) o

11:15
Iverson, V S; Morris, R M; Frazar, C D; Berthiaume, C T; Lin, E O; Morales, R L; Parker, M S; Schruth, D M; Armbrust, E V; EXPLORING MICROBIAL COMMUNITIES SIX BILLION BASES AT A TIME: COUPLED METAGENOMIC-PROTEOMIC ANALYSES PROVIDE NOVEL INSIGHTS INTO DIVERSITY (Abstract ID:4249) o

11:30
Kodner, R B; Armbrust, E V; Matsen, F A; PHYTOPLANKTON DIVERSITY AND GEOLOGICALLY RELEVANT CARBON: USING METAGENOMICS TO DETERMINE PHYTOPLANKTON BIOMARKER PRODUCTION (Abstract ID:4246) o

11:45
MacGregor, B J; Biddle, J F; TARGETED METAGENOMICS: MAXIMIZING RECOVERY OF PHYLOGENETICALLY IDENTIFIABLE FRAGMENTS (Abstract ID:5879) o

12:00
Johnston, A W; Todd, J D; Curson, A R; Nicholson, P; Nikolaidou-Katsaridou , M N; Sun, L; Sullivan, M; Kirkwood, M; FROM METAGENOMES TO GENES TO ENZYMES - THE REMARKABLE DIVERSITY OF MICROBIAL DIMETHYL SULPHIDE PRODUCTION IN THE OCEANS (Abstract ID:4073) o

12:15
Mills, H J; Reese, B; Dolan, B; Shepard, A; MOLECULAR GEOMICROBIOLOGICAL CHARACTERIZATION OF ANOXIC BASIN SEDIMENT MICROBIAL POPULATIONS WITHIN PALMYRA ATOLL LAGOON SYSTEM (Abstract ID:5890) o

14:30
Hubert, C; Ferdelman, T; Arnosti, C; Nickel, M; Vandieken, V; Brüchert, V; Barker Jørgensen, B; THERMOPHILIC SULFATE-REDUCING BACTERIA ARE ABUNDANT IN MARINE SEDIMENTS FROM PERMANENTLY COLD ARCTIC FJORDS (Abstract ID:5961) o

14:45
Rocap, G; Ahlgren, N A; TEMPO AND MODE OF GENOME EVOLUTION IN MARINE CYANOBACTERIAL ECOTYPES (Abstract ID:6005) o

15:00
Wecker, P; Klockow, C; Ellrott, A; Glöckner, F O; TRANSCRIPTIONAL PROFILING OF THE MODEL PLANCTOMYCETE RHODOPIRELLULA BALTICA COPING WITH FREQUENT CHANGING ENVIRONMENTAL CONDITIONS DURING ITS LIFE STYLE (Abstract ID:4511) o

15:15
De Riso, V; Raniello, R; Rogato, A; Maumus, F; Bowler, C; Falciatore, A; RNA INTERFERENCE IN THE MARINE DIATOM PHAEODACTYLUM TRICORNUTUM (Abstract ID:5691) o

15:30
Materna, A C; Lavaud, J; Sturm, S; Vugrinec, S; Kroth, P G; MOLECULAR TOOLS TO ELUCIDATE THE BIOLOGY OF DIATOMS (Abstract ID:5358) o

15:45
Moya, A; Ganot, P; Deleury, E; Allemand, D; Furla, P; Sabourault, C; EXPLORING SYMBIOTIC INTERACTIONS IN THE CNIDARIAN SEA ANEMONE- SYMBIODINIUM SP. MODEL BY LARGE-SCALE EST ANALYSIS (Abstract ID:5722) o

Poster Presentations

Zielinski, B L; Paul, B L; DEVELOPMENT OF A SYBR GREEN RT-QPCR ASSAY FOR DSRB GENE TRANSCRIPTS TO ASSESS THE RELATIVE ACTIVITY OF SULFATE REDUCING BACTERIA IN MARINE SEDIMENTS. (Abstract ID:5783) P

Torres-Alvarado, R; Ramírez-Vives, F; Fernández P., F; Barriga Sosa, I; Calva-Benítez, L; DINAMYC OF SULFATE REDUCING BACTERIA AND METHANOGENIC ARCHAEA IN TWO TROPICAL COASTAL LAGOONS IN MEXICO (Abstract ID:6003) P

Adams, D K; Angerer, L M; MOLECULAR MECHANISM UNDERLYING THE PLASTIC RESPONSE OF SEA URCHIN LARVAL FEEDING STRUCTURE TO FOOD AVAILABILITY (Abstract ID:5560) P

Strauss, J; DEVELOPMENT OF AN EXPRESSION VECTOR CONSTRUCT FOR THE MARINE MICROALGA EMILIANIA HUXLEYI (Abstract ID:5067) P

Morales, R L; Lin, E O; Frazar, C D; Iverson, V S; Morris, R M; Armbrust, E V; NEXT GENERATION SOLID SEQUENCING METHODS: AN OVERVIEW (Abstract ID:4325) P


Date: 01-29-09

Location: Les Muses

Please click on the title of an abstract to view the complete abstract.


Poster Presentations

Bombar, D; Moisander, P H; Voss, M; Grosse, J; Zehr, J P; ABUNDANCE OF DIAZOTROPHIC MICROORGANISMS AND NITROGENASE GENE (NIFH) EXPRESSION IN THE MEKONG RIVER PLUME DURING INTERMONSOON (Abstract ID:4484) P

Hung, S; Chung, C; Liao, C; Gong, G; Hwang, S L; Chang, J; THE EXPRESSION OF PHOSPHATE TRANSPORTER GENE (PSTS) IN PICOPLANKTON COMMUNITY: PRIMER DESIGN AND FIELD TESTS IN THE EAST CHINA SEA (Abstract ID:4664) P

Padilla-Crespo, E; Shearer, T L; Massol-Deya, A; Otero-Morales, E; Ritalahti , K M; Löffler , F E; DETECTION OF DECHLORINATING CHLOROFLEXI IN MARINE ENVIRONMENTS (Abstract ID:5150) P

Debroas, D; Humbert, J F; Capo, F; Bronner, G; COMPARATIVE ANALYSIS OF GENOME FRAGMENTS OF ACTINOBACTERIA AND ALPHAPROTEOBACTERIA FROM A FRENCH MESOTROPHIC LAKE (Abstract ID:5578) P

Shaul, N J; Aluwihare, L I; INVESTIGATING THE BIOTIC FORMATION OF METHOXYLATED POLYBROMINATED DIPHENYL ETHERS (MEO-PBDES) IN MARINE ECOSYSTEMS (Abstract ID:5982) P